CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22003112m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22003112m.g
T140431_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22003112m.p
C2H2 ZF
5
27
YKCSICGKVLPTKCHLAIHRRTH
Ocbimv22003112m.p
C2H2 ZF
33
55
YHCEICEKAFSQKGNLTEHKRTH
Ocbimv22003112m.p
C2H2 ZF
61
83
FHCEICGKSFSYKGYINTHKRTH
Ocbimv22003112m.p
C2H2 ZF
89
111
YHCEICGKTFSGCSSAKSHQLIH
Ocbimv22003112m.p
C2H2 ZF
117
139
YRCEICGKSFSQVGNLTRHKHTH
Ocbimv22003112m.p
C2H2 ZF
145
167
HKCDDCGKAFSNVSNFERHRSVH
Ocbimv22003112m.p
C2H2 ZF
171
193
YHCEICDKVFSVKESLTVHKRVH
Ocbimv22003112m.p
C2H2 ZF
199
221
YHCEVCGKGFTSSGTLIRHNRSH
Ocbimv22003112m.p
C2H2 ZF
227
249
HHCEICGKAFPEKYVLTLHKRIH
Ocbimv22003112m.p
C2H2 ZF
255
277
YHCEVCGKDFSGSCNLVNHKRIH
Ocbimv22003112m.p
C2H2 ZF
283
305
HHCEVCGKAFSQNGSLVRHRRIH
Ocbimv22003112m.p
C2H2 ZF
311
333
YHCLICGKEFSLKTSLTTHNRIH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
0 Related TFs
">No related TF found