CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22004030m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22004030m.g	T140452_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22004030m.p	C2H2 ZF	47	69	YHCNICGKTFSQRIYLTKHKRTH
Ocbimv22004030m.p	C2H2 ZF	75	97	YHCNICGQSFSESCNLKTHKRVH
Ocbimv22004030m.p	C2H2 ZF	103	125	YHCNICGKSFSVRCSLTTHKHTH
Ocbimv22004030m.p	C2H2 ZF	131	153	YHCDICGKSFIKNCNLNTHRFSH
Ocbimv22004030m.p	C2H2 ZF	159	181	YHCDICGKSFSVRFSLTIHKHTH
Ocbimv22004030m.p	C2H2 ZF	187	209	YHCDICGNSFSERHSLTKHRRTH
Ocbimv22004030m.p	C2H2 ZF	215	237	YQCDVCGKSFSVRFHLTRHKHIH
Ocbimv22004030m.p	C2H2 ZF	243	265	YHCDICGKSFSQNGSLTTHKFIH
Ocbimv22004030m.p	C2H2 ZF	271	293	YHCDTCGKSFTERSSLTKHRRTH
Ocbimv22004030m.p	C2H2 ZF	299	321	YQCDICGKSFSYTSHLKTHKRIH
Ocbimv22004030m.p	C2H2 ZF	327	349	YHCDTCGKTFSERYSLTKHSRTH
Ocbimv22004030m.p	C2H2 ZF	355	377	YQCDICGKQLCDASYLKRHKRIH
Ocbimv22004030m.p	C2H2 ZF	383	405	YHCDICGKSFSQNSIINKHKRTH
Ocbimv22004030m.p	C2H2 ZF	411	433	YQCDICGKSFSCNSHLTNHKRIH
Ocbimv22004030m.p	C2H2 ZF	439	461	YHCDICGKSFPQTSALTRHKRTH
Ocbimv22004030m.p	C2H2 ZF	467	489	YHCDTCGESFLQMSALTKHKLIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found