CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22004049m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22004049m.g	T140470_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22004049m.p	C2H2 ZF	17	39	YSCDICGKSFSRKSRLTIHKRTH
Ocbimv22004049m.p	C2H2 ZF	45	67	YHCLTCGKSFSDVSLFKTHRRIH
Ocbimv22004049m.p	C2H2 ZF	73	95	FHCDTCGKRFYQKIHLTNHIYIH
Ocbimv22004049m.p	C2H2 ZF	101	123	YRCDICGKSFSVNSSLTSHKRIH
Ocbimv22004049m.p	C2H2 ZF	129	151	YDCDVCDKSFSSNSNLIYHKRTH
Ocbimv22004049m.p	C2H2 ZF	157	179	YQCNICGKSFSLNSNLTRHKHIH
Ocbimv22004049m.p	C2H2 ZF	185	207	YRCDICGRSFSCNNHLIHHKRIH
Ocbimv22004049m.p	C2H2 ZF	213	235	YHCDICDKSFSSNSNMIQHKRIH
Ocbimv22004049m.p	C2H2 ZF	241	263	YRCDICGKSFSKNSTLSCHKHIH
Ocbimv22004049m.p	C2H2 ZF	297	319	YQCEICGKSFHSNSHLIYHKRVH
Ocbimv22004049m.p	C2H2 ZF	325	347	YHCDVCGKSFSGNSSLTTHKHIH
Ocbimv22004049m.p	C2H2 ZF	353	375	YDCDICDKSFSRHDSLTRHKRIH
Ocbimv22004049m.p	C2H2 ZF	381	403	YQCDICGESFSEYGTLTSHKRIH
Ocbimv22004049m.p	C2H2 ZF	409	431	YHCNICGKSFSQNNHLTRHKRIH
Ocbimv22004049m.p	C2H2 ZF	437	459	YQCDICGKSFFCNSRFIRHQRIH
Ocbimv22004049m.p	C2H2 ZF	465	487	HQCDICGKSFSENSTLTYHRRSH
Ocbimv22004049m.p	C2H2 ZF	494	515	HSNICGKSFIANSVLNKHKHVH
Ocbimv22004049m.p	C2H2 ZF	521	543	YHCDTCGKSFTQERVLSKHECIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found