CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22004324m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22004324m.g	T140476_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22004324m.p	C2H2 ZF	53	75	YHCDICGKSFTCSADISRHKCIH
Ocbimv22004324m.p	C2H2 ZF	81	103	YCCDICGKSFSQNSNLTAHKYIH
Ocbimv22004324m.p	C2H2 ZF	109	131	YRCDICGKSFTSSGNLTRHKRIH
Ocbimv22004324m.p	C2H2 ZF	137	159	YHCNICGKVFSRNSHLSKHKRIH
Ocbimv22004324m.p	C2H2 ZF	165	187	YHCDICGKVFSQNSHLSRHKRIH
Ocbimv22004324m.p	C2H2 ZF	193	215	SRCDICGKSFSQNNNLTKHKRTH
Ocbimv22004324m.p	C2H2 ZF	221	243	YHCDICAKSFTSSGNLTKHKRIH
Ocbimv22004324m.p	C2H2 ZF	249	271	YHCDICGKVFSQNGNLSKHKRVH
Ocbimv22004324m.p	C2H2 ZF	277	299	YHCDICGKSLTSSGNLTTHKRIH
Ocbimv22004324m.p	C2H2 ZF	305	327	YHCDICGKVFFQSSHLTTHKRTH
Ocbimv22004324m.p	C2H2 ZF	333	355	YHCGICGKSFSQNRYLNIHKCVH
Ocbimv22004324m.p	C2H2 ZF	361	383	YHCDICGESFLQSYDLTIHKRTH
Ocbimv22004324m.p	C2H2 ZF	389	411	YHCDICSKYFTSSGNLTRHKRIH
Ocbimv22004324m.p	C2H2 ZF	417	439	YHCEICGKSFSQNYDLTKHKRIH
Ocbimv22004324m.p	C2H2 ZF	445	467	YHCGICGKVFSQNRTLSIHKRVH
Ocbimv22004324m.p	C2H2 ZF	473	495	FHCGICGKSFSQNSYLTAHKRIH
Ocbimv22004324m.p	C2H2 ZF	501	523	YHCDICGKVFSQNSHLSTHKLIH
Ocbimv22004324m.p	C2H2 ZF	529	551	YHCDICGKSFTSSGSLTKHKRIH
Ocbimv22004324m.p	C2H2 ZF	557	579	YHCDICGKVFSQNSHLSTHKRIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found