CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22004699m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22004699m.g	T140497_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22004699m.p	C2H2 ZF	34	56	YHCDICKKSFTQKSNLTTHKRIH
Ocbimv22004699m.p	C2H2 ZF	62	84	YCCDICGKSFLRNDEVAIHKRIH
Ocbimv22004699m.p	C2H2 ZF	90	112	YHCDICGKSFSVKSTLTKHKRIH
Ocbimv22004699m.p	C2H2 ZF	118	140	YHCDICGKSFSEKGALTQHKRTH
Ocbimv22004699m.p	C2H2 ZF	146	168	YHCNICGKSFSQSSSLTKHKDLH
Ocbimv22004699m.p	C2H2 ZF	174	196	YQCDICGKSFSENGTLTTHKRIH
Ocbimv22004699m.p	C2H2 ZF	202	224	YHCDVCGKSFCQKNDLNTHKRIH
Ocbimv22004699m.p	C2H2 ZF	230	252	YHCNICGKSFTRSGELTSHKRIH
Ocbimv22004699m.p	C2H2 ZF	258	280	YCCAICGKSFSQGSALISHKRVH
Ocbimv22004699m.p	C2H2 ZF	286	308	YYCDICGKSFSVSSEITPHKRIH
Ocbimv22004699m.p	C2H2 ZF	314	336	YHCDICGKSFVRNDYLTNHKRIH
Ocbimv22004699m.p	C2H2 ZF	342	364	YHCDICGKSFSLSCQLTTHQRIH
Ocbimv22004699m.p	C2H2 ZF	370	392	YRCDICGKSFPQTCGLTSHKRIH
Ocbimv22004699m.p	C2H2 ZF	398	420	YHCDVCGKSFTVNSTLTKHKRIH
Ocbimv22004699m.p	C2H2 ZF	426	448	YHCDICGKTFSEGSALTKHRHVH
Ocbimv22004699m.p	C2H2 ZF	454	476	YHCNICGKMFSGCSNLTIHKRIH
Ocbimv22004699m.p	C2H2 ZF	482	504	YHCDICGKSFSVTSRLTNHKRIH
Ocbimv22004699m.p	C2H2 ZF	510	532	YCCNVCDKSFSEGSALTKHRRIH
Ocbimv22004699m.p	C2H2 ZF	538	560	YCCNICGKSFTVNSTLTKHKRIH
Ocbimv22004699m.p	C2H2 ZF	566	587	YHCVICGKSFSKKSHLAAHVCI

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found