CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22004824m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22004824m.g
T140500_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22004824m.p
C2H2 ZF
368
390
LFCDYCGKKFAQEYLMHMHRRKH
Ocbimv22004824m.p
C2H2 ZF
396
418
FQCDICHRQFSRRDVLKRHRKNH
Ocbimv22004824m.p
C2H2 ZF
490
512
YFCDICHKQFAQRYYLAIHRRSH
Ocbimv22004824m.p
C2H2 ZF
518
540
FQCDFCIQRFSRKDTLKIHRRTH
Ocbimv22004824m.p
C2H2 ZF
546
568
FQCDVCPEKFSQRIKLQMHKKTH
Ocbimv22004824m.p
C2H2 ZF
574
596
YQCDICHKQFAQRYYLRTHMTIH
Ocbimv22004824m.p
C2H2 ZF
603
624
QCDICLKQFAQRYYLQIHKRLH
Ocbimv22004824m.p
C2H2 ZF
630
652
LHCDVCLKKFTQKHYLVIHKRTH
Ocbimv22004824m.p
C2H2 ZF
658
680
YQCDFCIQKFARKTTLQIHRRTH
Ocbimv22004824m.p
C2H2 ZF
686
708
FHCDLCPEQFAQSNKLRAHKKLH
Ocbimv22004824m.p
C2H2 ZF
733
755
YQCDVCMKLFAQRHYLQVHKRSH
Ocbimv22004824m.p
C2H2 ZF
761
783
FQCEICFKQFAQRNTLQIHKRTH
Ocbimv22004824m.p
C2H2 ZF
789
811
FQCEVCLKNFAHKHYLQLHKRTH
Ocbimv22004824m.p
C2H2 ZF
817
839
FQCDFCFKQFAQRNSLHIHRRTH
Ocbimv22004824m.p
C2H2 ZF
845
867
FQCDFCFKTFAQKHYLRLHKRTH
Ocbimv22004824m.p
C2H2 ZF
873
895
FHCDLCPKHFARSDTLHRHKKTH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
0 Related TFs
">No related TF found