CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22005821m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22005821m.g	T140527_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22005821m.p	C2H2 ZF	34	56	YCCEICVKTFSSEHEVFKHKEIH
Ocbimv22005821m.p	C2H2 ZF	62	84	FHCKICGKYFVSNSKLTKHTRIH
Ocbimv22005821m.p	C2H2 ZF	90	112	FHCEICGKSFSDNSNLVVHMRIH
Ocbimv22005821m.p	C2H2 ZF	118	140	YSCEICGKSFSENSNLAVHRRIH
Ocbimv22005821m.p	C2H2 ZF	146	168	FHCEICGKSFVYNSKLTKHRRMH
Ocbimv22005821m.p	C2H2 ZF	174	196	FYCELCEKCFVDNSDLAAHKRKH
Ocbimv22005821m.p	C2H2 ZF	202	224	FNCETCGKSFLNNSHLVIHKRSH
Ocbimv22005821m.p	C2H2 ZF	230	252	YRCEICGKSFVDNSYVNRHKRIH
Ocbimv22005821m.p	C2H2 ZF	258	280	FHCEICGKSFITNSHLKTHKVSH
Ocbimv22005821m.p	C2H2 ZF	286	308	FHCEVCGKFYINNYSLVIHIRSH
Ocbimv22005821m.p	C2H2 ZF	314	336	FHCDICEKSFTTNSQLKTHKILH
Ocbimv22005821m.p	C2H2 ZF	342	364	FHCEICGKSYINNSYLILHIRSH
Ocbimv22005821m.p	C2H2 ZF	370	392	YYCEMCGKSFASNSNLTKHKLIH
Ocbimv22005821m.p	C2H2 ZF	398	420	FHCEMCEKSFINNSDLNRHKRTH
Ocbimv22005821m.p	C2H2 ZF	426	448	FSCEVCGKCFASNRDLTTHKRIH
Ocbimv22005821m.p	C2H2 ZF	453	475	YHCETCGKSFCANSSLIVHKLSH
Ocbimv22005821m.p	C2H2 ZF	481	503	YHCEVCGKSFNRNSHLKRHKEIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found