CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22005852m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22005852m.g	T140549_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22005852m.p	C2H2 ZF	10	32	YHCDICGKSISRSNDLIRHKRTH
Ocbimv22005852m.p	C2H2 ZF	38	60	FQCEICGKTFSLNYHLTSHRYIH
Ocbimv22005852m.p	C2H2 ZF	66	88	FPCDICGKSFSTNSHLTRHRRIH
Ocbimv22005852m.p	C2H2 ZF	94	116	LHCNVCGKSFTANSALIMHNRVH
Ocbimv22005852m.p	C2H2 ZF	122	144	YRCYICGKSFSQITLLKHHKQVH
Ocbimv22005852m.p	C2H2 ZF	150	172	FHCDICGKSFPTNSELTRHGRIH
Ocbimv22005852m.p	C2H2 ZF	178	200	FHCDICGKTFSVSSNLTAHKRSH
Ocbimv22005852m.p	C2H2 ZF	234	256	FHCDICGKSFTTNSDLTKHRRIH
Ocbimv22005852m.p	C2H2 ZF	262	284	YHCDICGKSFSINCNLTSHKRIH
Ocbimv22005852m.p	C2H2 ZF	290	312	FDCDICGISFSVSSTLTQHKRSH
Ocbimv22005852m.p	C2H2 ZF	318	340	YHCDICGKTFSQKFNLTRHKRIH
Ocbimv22005852m.p	C2H2 ZF	346	368	YHCDICGKSFPDISALLNHKRNH
Ocbimv22005852m.p	C2H2 ZF	374	396	FPCDICGKSFPINSHLTRHRRIH
Ocbimv22005852m.p	C2H2 ZF	402	424	FQCDICGKSFSRNCNLTSHKQIH
Ocbimv22005852m.p	C2H2 ZF	430	452	FHCDFCGKTFTAKGDLTQHRRIH
Ocbimv22005852m.p	C2H2 ZF	458	480	YDCDICGKSFSQNNHLTIHKYVH
Ocbimv22005852m.p	C2H2 ZF	486	508	FCCDFCGKSFSVKGNLTKHISIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found