CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22005855m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22005855m.g	T140551_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22005855m.p	C2H2 ZF	47	69	YHCDVCGKSFSQSIRLTTHKRIH
Ocbimv22005855m.p	C2H2 ZF	75	97	YHCDVCGKSFSSNFSLTTHQRIH
Ocbimv22005855m.p	C2H2 ZF	103	125	YHCDMCGKSFSQSGHLAGHKRIH
Ocbimv22005855m.p	C2H2 ZF	131	153	YHCDVCGKSFSQNAHLSTHIRIH
Ocbimv22005855m.p	C2H2 ZF	159	181	YQCDICGKSFSENTALTKHSRIH
Ocbimv22005855m.p	C2H2 ZF	187	208	YQCDICGISYSHNTLIIHKRVH
Ocbimv22005855m.p	C2H2 ZF	214	236	YDCDICGKSFSTNSVLTKHKRTH
Ocbimv22005855m.p	C2H2 ZF	242	264	YHCDTCGKSFSANSALIIHKRIH
Ocbimv22005855m.p	C2H2 ZF	270	292	YHCDICGKSFPGSSDLTKHYYIH
Ocbimv22005855m.p	C2H2 ZF	298	320	YHCDFCGKSFFRNSNLTQHRRIH
Ocbimv22005855m.p	C2H2 ZF	326	348	YHCDICGELFSQSTHLTTHKRIH
Ocbimv22005855m.p	C2H2 ZF	354	376	FHCDVCGKSFSQTSLLTKHKYIH
Ocbimv22005855m.p	C2H2 ZF	382	404	YHCDICSKSFSQSNHLTIHKYVH
Ocbimv22005855m.p	C2H2 ZF	410	432	YQCDICGKSFSSDSNLRKHKRIH
Ocbimv22005855m.p	C2H2 ZF	438	460	FPCDICGKSFSQSIHLTGHKRIH
Ocbimv22005855m.p	C2H2 ZF	466	488	YNCDICGKSFSESRSLTRHKSIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found