CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22005880m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22005880m.g	T140572_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22005880m.p	C2H2 ZF	33	55	LSCEICGKCFPADSHLKRHKRIH
Ocbimv22005880m.p	C2H2 ZF	61	83	FSCEICGKSFVCSSGLTRHIVVH
Ocbimv22005880m.p	C2H2 ZF	89	111	FHCEICGKCFTSNNILKVHKRIH
Ocbimv22005880m.p	C2H2 ZF	117	139	FHCEICGESFRTSGILAVHVSVH
Ocbimv22005880m.p	C2H2 ZF	145	167	FSCDICGKCFASNSYLQTHKRTH
Ocbimv22005880m.p	C2H2 ZF	173	195	FHCEICGKCFASNSYLQMHKKIH
Ocbimv22005880m.p	C2H2 ZF	201	223	FHCDICGKYYASNNHLQAHKRIH
Ocbimv22005880m.p	C2H2 ZF	229	251	FHCEICGKCFTSNYHLQMHKGIH
Ocbimv22005880m.p	C2H2 ZF	257	279	FHCEICGKFFTHNSNLKRHEGIH
Ocbimv22005880m.p	C2H2 ZF	285	307	FHCEICGECFNWNSNLNEHKRIH
Ocbimv22005880m.p	C2H2 ZF	313	335	FSCEICGKFFTRSRDLKRHKRTH
Ocbimv22005880m.p	C2H2 ZF	341	363	FHCEICGKCFIANYLLQTHKRTH
Ocbimv22005880m.p	C2H2 ZF	369	391	FHCEICGKCFTSSSNLQTHKRTH
Ocbimv22005880m.p	C2H2 ZF	397	419	FNCEICGKCFTYSSVLKTHKRIH
Ocbimv22005880m.p	C2H2 ZF	425	447	FNCEICGKCFTSNDYLQTHKRTH
Ocbimv22005880m.p	C2H2 ZF	453	475	FHCEICGKCFTSNIVLKTHKRIH
Ocbimv22005880m.p	C2H2 ZF	481	503	FHCGICGKCFTYSSVLKTHKRIH
Ocbimv22005880m.p	C2H2 ZF	537	559	FHCEICGESFRTSGILRAHKTVH
Ocbimv22005880m.p	C2H2 ZF	565	587	FNCEICGKSFNSNDYLQTHKRIH
Ocbimv22005880m.p	C2H2 ZF	593	610	FHCNVCGISFASSGAYAH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found