CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22006102m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22006102m.g
T140576_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22006102m.p
C2H2 ZF
6
25
QCDICGKIFRHDNMERHKNR
Ocbimv22006102m.p
C2H2 ZF
28
50
FPCDLCGRAFSQKSYLKLHKRIH
Ocbimv22006102m.p
C2H2 ZF
59
74
HAFSRNDHLVIHIRGH
Ocbimv22006102m.p
C2H2 ZF
80
102
FKCDVCGKAFSRPSYLTVHERIH
Ocbimv22006102m.p
C2H2 ZF
108
131
YQCHVCGCAFYRGDHLVRHRRKQH
Ocbimv22006102m.p
C2H2 ZF
317
339
LKCEFCNRTFSRRDHLERHKSSH
Ocbimv22006102m.p
C2H2 ZF
345
367
FVCKECGKSFSRKSYLTVHSRIH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
0 Related TFs
">No related TF found