CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22007388m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22007388m.g
T140675_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22007388m.p
C2H2 ZF
57
79
YGCPHCDKAFPRHSYLKLHEQEH
Ocbimv22007388m.p
C2H2 ZF
113
135
YKCSQCDAAFARSDHLKSHLRTH
Ocbimv22007388m.p
C2H2 ZF
141
163
FKCTICNRGYTTAAALSSHMYSH
Ocbimv22007388m.p
C2H2 ZF
174
197
YKCYQCEEIFYQPKDLQNHYNDCH
Ocbimv22007388m.p
C2H2 ZF
207
230
LQCTQCSEMFVSQELLDVHVEQEH
Ocbimv22007388m.p
C2H2 ZF
334
357
YTCNYCNAPYPNLYALHDHMKVVH
Ocbimv22007388m.p
C2H2 ZF
367
390
YPCSLCSRHFTSIDALAEHKKHTH
Ocbimv22007388m.p
C2H2 ZF
476
498
MVCDQCNATFLDIKNFQTHLKIH
Ocbimv22007388m.p
C2H2 ZF
506
528
YICPQCQKQFTTEDQLESHLSLH
Ocbimv22007388m.p
C2H2 ZF
536
559
YGCTSCMKTFSKPDELQKHLMDIH
Ocbimv22007388m.p
C2H2 ZF
564
587
YRCSLCKEIFDSKVNIQVHFAIKH
Ocbimv22007388m.p
C2H2 ZF
594
617
YKCTKCNSVFISEVDWQLHVRSAH
Ocbimv22007388m.p
C2H2 ZF
650
673
FKCPMCSEAFHVEYLLDKHLQNEH
Ocbimv22007388m.p
C2H2 ZF
727
750
HTCNICDMKFSNLSSLQLHKKQDH
Ocbimv22007388m.p
C2H2 ZF
785
807
LSCTYCSQSFKSRTELERHMKIH
Ocbimv22007388m.p
C2H2 ZF
813
835
QKCNICDEVFPSPNTLAEHKLQH
Ocbimv22007388m.p
C2H2 ZF
941
963
FHCNECGARFPTNEQLESHVTKH
Ocbimv22007388m.p
C2H2 ZF
967
989
YQCIKCQQSFSTEYEIQLHVATH
Ocbimv22007388m.p
C2H2 ZF
997
1019
HECKLCSQVFDSPAKLQCHLIEH
Ocbimv22007388m.p
C2H2 ZF
1026
1048
YRCSVCCKVFSNATDIQAHAFEH
Ocbimv22007388m.p
C2H2 ZF
1086
1108
LQCKDCPQTFSNIVSFNAHRRIH
Ocbimv22007388m.p
C2H2 ZF
1120
1143
IKCTFCHEVFNDTSELQKHFFTCH
Ocbimv22007388m.p
C2H2 ZF
1157
1179
YQCSQCNKECSSLANLQNHMKIH
Ocbimv22007388m.p
C2H2 ZF
1202
1224
LCPVCGQVFSKRSLMKEHMNTVH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
0 Related TFs
">No related TF found