CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22008691m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22008691m.g	T140699_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22008691m.p	C2H2 ZF	9	30	YNCDVCKKSFSKAVTLTTHKCI
Ocbimv22008691m.p	C2H2 ZF	32	55	SCHCDVCGKSLFDKNTLTKHKRIH
Ocbimv22008691m.p	C2H2 ZF	61	83	YHCDMCGMSFSRADGLASHKYIH
Ocbimv22008691m.p	C2H2 ZF	89	111	HSCEICGKSFSYKHHLVRHNYVH
Ocbimv22008691m.p	C2H2 ZF	117	139	HHCDICGNSFSDGSTLTKHKRIH
Ocbimv22008691m.p	C2H2 ZF	145	167	YHCVICGKSFPQIIHLTRHIKSH
Ocbimv22008691m.p	C2H2 ZF	173	195	YKCDFCDKSFSQAYILAKHVRTH
Ocbimv22008691m.p	C2H2 ZF	201	223	HHCDVCGKSFSDKSSLRNHKEIH
Ocbimv22008691m.p	C2H2 ZF	229	251	YHCDICGKSFSVSTYLANHKRRH
Ocbimv22008691m.p	C2H2 ZF	257	279	YTCDICGNSFTVKGSLTNHKRIH
Ocbimv22008691m.p	C2H2 ZF	285	307	YHCDICGKSFSVKSVLQQHKRVH
Ocbimv22008691m.p	C2H2 ZF	313	335	YHCVICGKSFPQVIYLTRHIKSH
Ocbimv22008691m.p	C2H2 ZF	341	363	YKCDFCDKAFSQKFILINHVRTH
Ocbimv22008691m.p	C2H2 ZF	369	391	FHCNVCDKSFTDKSNLSRHKQIH
Ocbimv22008691m.p	C2H2 ZF	397	419	YHCDICGDSFCQKESLTEHACIH
Ocbimv22008691m.p	C2H2 ZF	425	447	YQCDICGKSFSLRGTLKQHKRIH
Ocbimv22008691m.p	C2H2 ZF	453	475	YCCYICGNSFLIASNLKKHMSIH
Ocbimv22008691m.p	C2H2 ZF	481	503	YQCDICGKSFSQIENLTEHKSVH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found