CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22008694m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22008694m.g	T140701_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22008694m.p	C2H2 ZF	9	31	YTCNICKKSFSKALTLTNHRCHH
Ocbimv22008694m.p	C2H2 ZF	28	52	RCHHCDVCGKSFSRADSLASHKYTH
Ocbimv22008694m.p	C2H2 ZF	59	81	YSCDICGKSFSHKHHLARHNYVH
Ocbimv22008694m.p	C2H2 ZF	87	109	YHCDICGNSFSDGSTLTKHKRIH
Ocbimv22008694m.p	C2H2 ZF	115	137	YRCDICGISFSQIIHLTRHITSH
Ocbimv22008694m.p	C2H2 ZF	143	165	YKCDVCNKLFSQAYTLAQHVRTH
Ocbimv22008694m.p	C2H2 ZF	171	193	YHCDICGESFCQNNLLAAHKYIH
Ocbimv22008694m.p	C2H2 ZF	199	221	YYCDICGDGFSQKCALVAHGYVH
Ocbimv22008694m.p	C2H2 ZF	227	249	YRCHVCGDGFSERSALNAHAYVH
Ocbimv22008694m.p	C2H2 ZF	255	277	YHCDMCGKSFFFRGSFTKHKLIH
Ocbimv22008694m.p	C2H2 ZF	283	305	FHCNICGQSFSDKSVLCDHKQIH
Ocbimv22008694m.p	C2H2 ZF	311	333	HQCDICGKSFSQSRALTNHLRSH
Ocbimv22008694m.p	C2H2 ZF	339	361	YRCDICGKSFSVKSTLKKHSRIH
Ocbimv22008694m.p	C2H2 ZF	367	389	YHCDICGYSSSIESNIIQHKRIH
Ocbimv22008694m.p	C2H2 ZF	395	417	HRCDICGKSFSIASNLNRHMYIH
Ocbimv22008694m.p	C2H2 ZF	423	445	YHCDICGKTFTVSSNLKVHKRTH
Ocbimv22008694m.p	C2H2 ZF	451	473	FYCDICGKSFSENRFLKKHRLNH
Ocbimv22008694m.p	C2H2 ZF	479	501	YHCNICGKSFSENRFLKKHKLSH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found