CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22008695m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22008695m.g
T140702_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22008695m.p
C2H2 ZF
10
32
YECDICQKPFSQKCNLTTHKYIH
Ocbimv22008695m.p
C2H2 ZF
38
60
HHCDVCGKSFSQNTHLTRHKRIH
Ocbimv22008695m.p
C2H2 ZF
66
88
YHCDVCGRSFAEGSNLAKHKYVH
Ocbimv22008695m.p
C2H2 ZF
94
116
HHCDVCGKTFSQAGALTTHKRIH
Ocbimv22008695m.p
C2H2 ZF
122
144
YNCEVCGKSFSRNNTLTIHKYIH
Ocbimv22008695m.p
C2H2 ZF
150
172
YKCDICGKSFSQSDTLNKHKYIH
Ocbimv22008695m.p
C2H2 ZF
178
200
YHCKICGESFSQYNLLNRHKSIH
Ocbimv22008695m.p
C2H2 ZF
206
228
YDCDICGKSFPEGSSLAKHVLIH
Ocbimv22008695m.p
C2H2 ZF
234
256
YHCDICGQSFSQKPHLTNHKRIH
Ocbimv22008695m.p
C2H2 ZF
262
284
YCCDICGKSFSHTGSLTTHKYTH
Ocbimv22008695m.p
C2H2 ZF
290
312
YRCDVCGKSFSQKSNLSTHKYIH
Ocbimv22008695m.p
C2H2 ZF
318
340
YHCDICGKSFSGGSTLTNHKRSH
Ocbimv22008695m.p
C2H2 ZF
346
368
FHCDICGKSFSKNDTLTKHIRIH
Ocbimv22008695m.p
C2H2 ZF
374
396
YQCDVCGKSFSKNSHLTRHKHTH
Ocbimv22008695m.p
C2H2 ZF
430
451
YHCGICGKSFSEQSSLTRHKRI
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
0 Related TFs
">No related TF found