CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22008788m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22008788m.g
T140708_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22008788m.p
C2H2 ZF
80
102
FECLICGKVFLQNSYLTRHKLTH
Ocbimv22008788m.p
C2H2 ZF
108
130
HHCDICDKTFSVRSTLTNHRRIH
Ocbimv22008788m.p
C2H2 ZF
136
158
YHCDICGRSFTQLNHLSRHKYIH
Ocbimv22008788m.p
C2H2 ZF
164
186
FHCDICGKTFSQTDSLTRHIRIH
Ocbimv22008788m.p
C2H2 ZF
192
214
YQCGICSKTFARSSNLNVHKYIH
Ocbimv22008788m.p
C2H2 ZF
220
242
HCCDVCGKTFSGRGNMTVHRRTH
Ocbimv22008788m.p
C2H2 ZF
248
270
YHCDICGKAFSAYYTLASHKQAH
Ocbimv22008788m.p
C2H2 ZF
276
298
YRCDICGKTFTRSSRLTNHIRIH
Ocbimv22008788m.p
C2H2 ZF
304
326
YHCKTCGKTFSQNVHLTQHVRVH
Ocbimv22008788m.p
C2H2 ZF
332
354
YHCDICGKTFSQNTHLKIHIRGH
Ocbimv22008788m.p
C2H2 ZF
360
382
YSCDICGKTFSDNQHLTRHRPVH
Ocbimv22008788m.p
C2H2 ZF
388
411
YRCNICGRTFSKNKILTNHKQKAH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
0 Related TFs
">No related TF found