CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22008811m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22008811m.g
T140724_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22008811m.p
C2H2 ZF
81
103
FECLICGKTFSRRCYLRRHKTIH
Ocbimv22008811m.p
C2H2 ZF
109
131
YRCDICDKAFSQSSTLTNHRRIH
Ocbimv22008811m.p
C2H2 ZF
137
159
YHCKVCGRRFTQNGHLSRHKYIH
Ocbimv22008811m.p
C2H2 ZF
165
187
HRCDICGKSFSQIDSLTRHKLIH
Ocbimv22008811m.p
C2H2 ZF
193
215
YQCGICGKTFSRSSYLNVHKSVH
Ocbimv22008811m.p
C2H2 ZF
221
243
HRCDVCGKAFSGRSTLTNHKRIH
Ocbimv22008811m.p
C2H2 ZF
249
271
YHCGICGKTFSGGNSLTSHIQGH
Ocbimv22008811m.p
C2H2 ZF
277
299
YHCDICGKTFSSSSRLTNHIRIH
Ocbimv22008811m.p
C2H2 ZF
305
327
YHCNTCGKAFSQNSHLTQHVRVH
Ocbimv22008811m.p
C2H2 ZF
333
355
HHCDICGKTFTQRGHLTIHIRGH
Ocbimv22008811m.p
C2H2 ZF
361
383
YSCDICGKAYADNQSLTRHKPVH
Ocbimv22008811m.p
C2H2 ZF
389
411
HRCDVCGKAFTQSTHLKIHLRGH
Ocbimv22008811m.p
C2H2 ZF
417
439
FSCDICGKTFSDNQHLTRHRPVH
Ocbimv22008811m.p
C2H2 ZF
445
468
YGCDICDKTFSIKRSLANHKKKVH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
0 Related TFs
">No related TF found