CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22008867m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22008867m.g	T140737_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22008867m.p	C2H2 ZF	58	80	YQCKECDKNFTRNSSLYRHQLIH
Ocbimv22008867m.p	C2H2 ZF	86	108	YHCDICGRKFSRESSLRTHKYTH
Ocbimv22008867m.p	C2H2 ZF	114	136	FQCDVCGKKFTGSSDLTCHKRTH
Ocbimv22008867m.p	C2H2 ZF	142	164	YQCDICDKRFMGNRDLSRHKRIH
Ocbimv22008867m.p	C2H2 ZF	170	192	YHCDICGKSFSRDSNLYRHIRIH
Ocbimv22008867m.p	C2H2 ZF	199	221	CQCNICGKTFSDNANLTRHIRIH
Ocbimv22008867m.p	C2H2 ZF	227	249	YQCDICNKTFSLRSGLFSHKRIH
Ocbimv22008867m.p	C2H2 ZF	255	277	YPCDICGKSFSTSSNLNSHKRSH
Ocbimv22008867m.p	C2H2 ZF	283	305	YHCDFCDKTFSMCSSLSNHKHIH
Ocbimv22008867m.p	C2H2 ZF	311	333	YCCDICGKTFSTKSHLNRHLHIH
Ocbimv22008867m.p	C2H2 ZF	350	372	YPCDICGKSFSVSSNLYTHKRTH
Ocbimv22008867m.p	C2H2 ZF	404	426	YHCDICGKAFSMKCSLSKHNRTH
Ocbimv22008867m.p	C2H2 ZF	432	454	YGCGICNKRFSRSSSLSTHKRFH
Ocbimv22008867m.p	C2H2 ZF	460	482	HRCSICGKSFSAASGLYFHKRTH
Ocbimv22008867m.p	C2H2 ZF	488	510	HYCEICGKTFSMSCSLSNHKLTH
Ocbimv22008867m.p	C2H2 ZF	516	538	YHCGDCDKTFTYNSSLYHHKRIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found