CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22009226m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22009226m.g
T140747_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22009226m.p
C2H2 ZF
4
25
YDCDVCTKSFQESNLIMHKHTH
Ocbimv22009226m.p
C2H2 ZF
31
53
YQCVICGKSFSASGTLTTHIRVH
Ocbimv22009226m.p
C2H2 ZF
59
81
YRCGICGKSFSNSSHLSTHKYIH
Ocbimv22009226m.p
C2H2 ZF
87
109
YHCGICGKSFSDNSNLTKHTRFH
Ocbimv22009226m.p
C2H2 ZF
115
137
YHCDICGKSFPYSNSLLRHGYIH
Ocbimv22009226m.p
C2H2 ZF
143
164
YQCDICGESFDRSQLSKHKRIH
Ocbimv22009226m.p
C2H2 ZF
170
192
YNCDICGQSFSLSGQVAVHKRTH
Ocbimv22009226m.p
C2H2 ZF
198
220
YRCDICGQSFSQRGALSRHKYIH
Ocbimv22009226m.p
C2H2 ZF
226
248
FHCDTCGQSFFQRGALSIHTRIH
Ocbimv22009226m.p
C2H2 ZF
254
276
YHCDICGKSFSSAGHLSTHKYIH
Ocbimv22009226m.p
C2H2 ZF
282
304
YHCDICGKSFSYNSSLKKHIRFH
Ocbimv22009226m.p
C2H2 ZF
310
332
YSCYICGKSFSNSSHLSTHRYVH
Ocbimv22009226m.p
C2H2 ZF
338
360
YHCDFCNKTFSDSSNLTKHTRLH
Ocbimv22009226m.p
C2H2 ZF
366
388
YHCDICGKSFSQSNDLKKHKRVH
Ocbimv22009226m.p
C2H2 ZF
394
415
YHCDICGKSFSQSIHLTKHKHI
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
0 Related TFs
">No related TF found