CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22009434m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22009434m.g	T140754_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22009434m.p	C2H2 ZF	10	32	HDCDICGKIFSESRKLMKHKYIH
Ocbimv22009434m.p	C2H2 ZF	38	60	YHCDICGKSFFGTGNLTIHKRSH
Ocbimv22009434m.p	C2H2 ZF	66	88	YHCDICDKCFSANSSLTKHKLNH
Ocbimv22009434m.p	C2H2 ZF	94	116	YHCDICGKSFFHNPHLTRHKRIH
Ocbimv22009434m.p	C2H2 ZF	122	144	FHCDICGKSFSQGHHLTEHKRSH
Ocbimv22009434m.p	C2H2 ZF	150	172	YHCDICGRSFSESGKLTRHKRIH
Ocbimv22009434m.p	C2H2 ZF	178	200	YQCDICGKSFSQTGELSSHRHIH
Ocbimv22009434m.p	C2H2 ZF	206	228	YQCDICGKSFSQNGELTVHMYTH
Ocbimv22009434m.p	C2H2 ZF	234	256	YHCDICGKSFSHNPRLTVHKRIH
Ocbimv22009434m.p	C2H2 ZF	262	284	YHCDICGKSFSQNQRVIEHKRTH
Ocbimv22009434m.p	C2H2 ZF	290	311	YHCDCGKAFSVNGKLITHKRIH
Ocbimv22009434m.p	C2H2 ZF	317	339	YRCDICGKSFSLRGNLTTHKRIH
Ocbimv22009434m.p	C2H2 ZF	345	367	FCCNICSKTFLRSGDLTIHMRVH
Ocbimv22009434m.p	C2H2 ZF	373	395	YHCDICGKSFSRNHNLTNHKQIH
Ocbimv22009434m.p	C2H2 ZF	401	423	HRCIICGKSFLRSRDLTIHIRIH
Ocbimv22009434m.p	C2H2 ZF	429	451	YQCDICGKCFSVVSSLINHKHIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found