CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22009703m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22009703m.g	T140767_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22009703m.p	C2H2 ZF	34	56	HTCNICFKIFSDIDSLTNHKHIH
Ocbimv22009703m.p	C2H2 ZF	62	84	HLCNVCGKKFSRKTILTRHKQTH
Ocbimv22009703m.p	C2H2 ZF	118	140	YVCNVCGKKFSLKTNLTRHKHSH
Ocbimv22009703m.p	C2H2 ZF	146	168	YRCEICPKAFLKFEELSSHIQTH
Ocbimv22009703m.p	C2H2 ZF	174	196	YRCDICNKAFSKRKTLAIHKHIH
Ocbimv22009703m.p	C2H2 ZF	202	224	YHCNVCGKTFSKSKPLTIHKRIH
Ocbimv22009703m.p	C2H2 ZF	230	252	YECDVCGKAFSQSGYLTSHKLIH
Ocbimv22009703m.p	C2H2 ZF	258	280	FQCDTCDKTFSRKDYLKRHRRIH
Ocbimv22009703m.p	C2H2 ZF	286	308	YECEICGKRFSGSANLTCHKRKH
Ocbimv22009703m.p	C2H2 ZF	314	336	YECNICGKTFSTTGNLSCHKRIH
Ocbimv22009703m.p	C2H2 ZF	342	364	YQCEICKKTFAQNGHLTNHRSVH
Ocbimv22009703m.p	C2H2 ZF	370	392	YHCDICDRRFSITGDLRRHKLTH
Ocbimv22009703m.p	C2H2 ZF	398	420	YQCDICGKKFTTNENLNSHKHIH
Ocbimv22009703m.p	C2H2 ZF	425	447	HQCDICGKIFSLKRYLIRHKHIH
Ocbimv22009703m.p	C2H2 ZF	453	475	FKCDICGKTFSLLANLTLHKHMH
Ocbimv22009703m.p	C2H2 ZF	481	503	YSCDICGKIFARKRYLIRHKHIH
Ocbimv22009703m.p	C2H2 ZF	537	559	HQCDICGKIFAQKRYLIRHKHIH
Ocbimv22009703m.p	C2H2 ZF	563	585	YHCDVCNKTFSRNEYLTLHKRIH
Ocbimv22009703m.p	C2H2 ZF	591	613	YPCDICGKAFSASKILTRHKFTH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found