CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22009844m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22009844m.g
T140772_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22009844m.p
C2H2 ZF
59
81
YRCDICSKSYSQMNYLTRHKRTH
Ocbimv22009844m.p
C2H2 ZF
87
109
HNCDTCGKSFSRSDSLTKHKRVH
Ocbimv22009844m.p
C2H2 ZF
115
137
YHCDVCGKSFSCGSTLTIHKRIH
Ocbimv22009844m.p
C2H2 ZF
143
165
YHCDICGLSFSQSIRLAIHKRIH
Ocbimv22009844m.p
C2H2 ZF
171
193
YHCDICGKTFSEKGVLNIHKRIH
Ocbimv22009844m.p
C2H2 ZF
199
221
YHCDICGKSFSHGSTLTSHKYIH
Ocbimv22009844m.p
C2H2 ZF
227
249
YHCDICGRSFSQVGQVTIHKRIH
Ocbimv22009844m.p
C2H2 ZF
255
277
YQCDICGKSVSRSDQLSEHKRTH
Ocbimv22009844m.p
C2H2 ZF
283
305
YHCDICGKSFTVSSSLTIHKRIH
Ocbimv22009844m.p
C2H2 ZF
311
333
YHCDICSESFARNDHLTEHRYIH
Ocbimv22009844m.p
C2H2 ZF
339
361
YQCDICGKTLSGSSGLTKHKRIH
Ocbimv22009844m.p
C2H2 ZF
367
389
YHCDICGKSFSLNQHLIKHIRIH
Ocbimv22009844m.p
C2H2 ZF
395
416
FHCNICSRSFAQSSQLNKHKCI
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
0 Related TFs
">No related TF found