CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22010813m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22010813m.g	T140795_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22010813m.p	C2H2 ZF	4	26	YRCDICGRSFSLKVNLTVHVRTH
Ocbimv22010813m.p	C2H2 ZF	32	54	HHCDVCSKSFSRLTNLRAHKRIH
Ocbimv22010813m.p	C2H2 ZF	60	82	HQCDICGKSFSQKSGLTVHIRMH
Ocbimv22010813m.p	C2H2 ZF	88	110	HQCDICGKSFSQNSGLTDHVRVH
Ocbimv22010813m.p	C2H2 ZF	116	138	YHCDICSKSFSQLPSLHGHKRIH
Ocbimv22010813m.p	C2H2 ZF	144	166	HHCDICGKSFIRSSNLASHKYIH
Ocbimv22010813m.p	C2H2 ZF	172	194	YQCDICGKSFPITSHLIVHVRSH
Ocbimv22010813m.p	C2H2 ZF	200	222	YPCNICGKSFSTSSALTAHKYVH
Ocbimv22010813m.p	C2H2 ZF	228	250	YSCDVCGKSFSQLNRLTSHKYVH
Ocbimv22010813m.p	C2H2 ZF	256	278	YQCDICGKSFSRNQGLIYHKSIH
Ocbimv22010813m.p	C2H2 ZF	284	306	YDCRICGKSFYTRNQLTTHKYIH
Ocbimv22010813m.p	C2H2 ZF	312	334	YDCDICGKSFSRNEDLTVHKHTH
Ocbimv22010813m.p	C2H2 ZF	340	362	YRCDVCGKSFSLRGSLTTHKYIH
Ocbimv22010813m.p	C2H2 ZF	368	390	YQCDICGKSFSHLTSLHTHKCIH
Ocbimv22010813m.p	C2H2 ZF	404	426	YHCDICSKSFANTSDLTVHIRIH
Ocbimv22010813m.p	C2H2 ZF	432	445	YQCDICGKSFSRND

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found