CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22011387m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22011387m.g	T140813_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22011387m.p	C2H2 ZF	9	30	YRCDVCGELFSIKSNFDAHKCT
Ocbimv22011387m.p	C2H2 ZF	37	59	YHCEYCRKVFYRKCTLTDHTRIH
Ocbimv22011387m.p	C2H2 ZF	65	87	YGCEICGKAFSFSSNLSRHIRIH
Ocbimv22011387m.p	C2H2 ZF	93	115	HNCDICGKAFSCNSALSYHKRIH
Ocbimv22011387m.p	C2H2 ZF	121	143	HHCQICGKGFSFVSKLAIHVRIH
Ocbimv22011387m.p	C2H2 ZF	149	171	YNCEICGKAFSCNNKLTYHKRIH
Ocbimv22011387m.p	C2H2 ZF	177	199	YHCEICGKAFIFNNHLAYHKRTH
Ocbimv22011387m.p	C2H2 ZF	205	227	YQCKICGKAFSCGSYLKDHKRIH
Ocbimv22011387m.p	C2H2 ZF	233	255	YDCDICGKAFSSSTQLSSHKHRH
Ocbimv22011387m.p	C2H2 ZF	261	283	YHCGFCGKTFPLQSQLSLHKIIH
Ocbimv22011387m.p	C2H2 ZF	289	311	YSCEICGKTFSLKSRLTFHKVVH
Ocbimv22011387m.p	C2H2 ZF	344	366	YRCEICDKVFSHSSNLAAHRRLH
Ocbimv22011387m.p	C2H2 ZF	372	394	YHCEICGKKFSCNSKLTDHKWSH
Ocbimv22011387m.p	C2H2 ZF	400	422	YHCEICEKSFSRKSNLSRHKRTH
Ocbimv22011387m.p	C2H2 ZF	428	450	YQCEFCEKAFHRKCHLSEHTRIH
Ocbimv22011387m.p	C2H2 ZF	456	478	YQCEICDKTFYRKDHLAEHTRIH
Ocbimv22011387m.p	C2H2 ZF	484	506	YQCEICDKAFSSSSHLSYHIRIH
Ocbimv22011387m.p	C2H2 ZF	512	534	YQCEICGEAFSRNRNLIRHKQIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found