CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22012528m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22012528m.g
T140864_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22012528m.p
C2H2 ZF
240
262
LFCDFCGKHFTQEYLMHNHRRTH
Ocbimv22012528m.p
C2H2 ZF
268
290
FGCDICGKQFGRRDTLQRHKRNH
Ocbimv22012528m.p
C2H2 ZF
405
427
YQCDICFKPFAQRHYLRIHKRSH
Ocbimv22012528m.p
C2H2 ZF
433
456
YQCDFCIQKFARRDTLLIHRRTQH
Ocbimv22012528m.p
C2H2 ZF
462
485
HHCELCGEAFYHRSQLKMHRRAKH
Ocbimv22012528m.p
C2H2 ZF
545
567
YQCDYCFKQFAQRYYLQIHRRIH
Ocbimv22012528m.p
C2H2 ZF
573
595
LHCDVCYKKFTQKHYLQIHKRTH
Ocbimv22012528m.p
C2H2 ZF
601
623
FQCDFCIQKFARKTTLQIHRRTH
Ocbimv22012528m.p
C2H2 ZF
629
651
YQCDVCLKQFAQRDKLTVHRRTH
Ocbimv22012528m.p
C2H2 ZF
657
679
YQCDICFKQFAQRHYLQLHQRSH
Ocbimv22012528m.p
C2H2 ZF
685
707
FQCDICFKQFSRKNSLQMHTRSH
Ocbimv22012528m.p
C2H2 ZF
713
735
FHCDICFKQFAQRQYLQLHKRTH
Ocbimv22012528m.p
C2H2 ZF
741
763
YQCDICAKHFARRDTLQRHKRIH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
0 Related TFs
">No related TF found