CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22012544m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22012544m.g
T140872_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22012544m.p
C2H2 ZF
277
299
LFCDYCGKKFAQEYLMHMHRRKH
Ocbimv22012544m.p
C2H2 ZF
305
327
FQCDVCNKQFSRKDVMKRHKKNH
Ocbimv22012544m.p
C2H2 ZF
363
385
FQCDVCMKYFGTRNYLEIHKRTH
Ocbimv22012544m.p
C2H2 ZF
391
413
FQCDFCIQKFARRDTLQIHRRTH
Ocbimv22012544m.p
C2H2 ZF
419
441
FQCEVCQERFSQRIKLQIHQKTH
Ocbimv22012544m.p
C2H2 ZF
447
469
HQCEFCLKHFAQRYYLQIHRRLH
Ocbimv22012544m.p
C2H2 ZF
475
497
MHCDICLKKFTQKHYLIIHRRTH
Ocbimv22012544m.p
C2H2 ZF
503
525
FQCDFCIQKFARKTTLQIHRRTH
Ocbimv22012544m.p
C2H2 ZF
531
553
FHCEICDKRFAQSDKLRVHRRTH
Ocbimv22012544m.p
C2H2 ZF
559
581
YQCDICLKMFAQRHYLHVHQRSH
Ocbimv22012544m.p
C2H2 ZF
587
609
FQCEVCFKQFAQRNTLQIHKRTH
Ocbimv22012544m.p
C2H2 ZF
615
637
FQCDVCLKNFAHKHYLRLHKRTH
Ocbimv22012544m.p
C2H2 ZF
643
665
FQCDFCLKQFAQKNSLKIHCRTH
Ocbimv22012544m.p
C2H2 ZF
671
693
YQCEICFKSFAQRQYLRLHKITH
Ocbimv22012544m.p
C2H2 ZF
699
721
YHCDMCPKQFTRGDTLQRHKKTH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
0 Related TFs
">No related TF found