CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22012574m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22012574m.g	T140888_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22012574m.p	C2H2 ZF	191	213	HRCQICNEEFAGFLDLEKHKLTH
Ocbimv22012574m.p	C2H2 ZF	219	241	FDCKICSKTFTRRNHLKQHKRTH
Ocbimv22012574m.p	C2H2 ZF	252	274	FQCNVCGLRFSQKINLIDHEKNH
Ocbimv22012574m.p	C2H2 ZF	333	355	YKCNYCERTFSRNGDLMRHMRFH
Ocbimv22012574m.p	C2H2 ZF	379	401	FKCNICERVFSRNGDLTRHFRVH
Ocbimv22012574m.p	C2H2 ZF	420	442	FKCNICQSTFSTNGNLTRHMKIH
Ocbimv22012574m.p	C2H2 ZF	461	483	FFCNVCGIEFTRNGDLTRHFKTH
Ocbimv22012574m.p	C2H2 ZF	504	526	FKCNICGLAFSQNNDLTRHMKSH
Ocbimv22012574m.p	C2H2 ZF	550	572	FSCRLCRRVFSTFIDMTEHMKMH
Ocbimv22012574m.p	C2H2 ZF	627	649	IICPICKRLFSRPGDLTRHMRTH
Ocbimv22012574m.p	C2H2 ZF	669	691	FKCNICTRTFSRNGDLTRHFRSH
Ocbimv22012574m.p	C2H2 ZF	712	734	HRCNTCCSVFSTNGNLTRHMKIH
Ocbimv22012574m.p	C2H2 ZF	755	777	FRCTICQNYFSTNGNLTRHMKTH
Ocbimv22012574m.p	C2H2 ZF	841	863	FTCVICEKVFTNCEMFERHVRSH
Ocbimv22012574m.p	C2H2 ZF	869	891	FICEICGKGFVQKYHLTVHKRTH
Ocbimv22012574m.p	C2H2 ZF	897	918	FKCNLCGFAFSRKDHLVRHQRD

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found