CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22012575m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22012575m.g	T140889_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22012575m.p	C2H2 ZF	60	82	FFCSFCNKAFSQQIFLRNHERTH
Ocbimv22012575m.p	C2H2 ZF	88	110	FTCNTCGKAFSLLVNLKSHQRVH
Ocbimv22012575m.p	C2H2 ZF	116	138	FHCAICSKSFSQQGNLKIHLRTH
Ocbimv22012575m.p	C2H2 ZF	144	166	YKCDKCEKCFSQKTNLDSHKRVH
Ocbimv22012575m.p	C2H2 ZF	171	193	FTCQICSKAFTLEINLHNHQRIH
Ocbimv22012575m.p	C2H2 ZF	199	221	FVCTYCNRRFSQQSALRNHERLH
Ocbimv22012575m.p	C2H2 ZF	227	249	YQCTFCSKSFSQQGTLKAHLCSH
Ocbimv22012575m.p	C2H2 ZF	255	277	FHCDLCDRSFSQKTNLDSHKRIH
Ocbimv22012575m.p	C2H2 ZF	282	304	FKCSTCPKAFTLEINLRNHERVH
Ocbimv22012575m.p	C2H2 ZF	310	332	FACTFCSSRFSQQSALNNHERLH
Ocbimv22012575m.p	C2H2 ZF	338	360	YHCTYCSKSFSQQGTLKAHLCSH
Ocbimv22012575m.p	C2H2 ZF	366	388	FHCDQCDRSFSQKTNLDSHKRIH
Ocbimv22012575m.p	C2H2 ZF	393	415	FKCLVCGKAFTLEINLQNHERIH
Ocbimv22012575m.p	C2H2 ZF	421	443	YKCTYCPKAFCQQTEQKSHIRTH
Ocbimv22012575m.p	C2H2 ZF	449	471	FKCSYCPKAFSQQSNQKMHERIH
Ocbimv22012575m.p	C2H2 ZF	477	499	YSCEQCSKTFSQRANLENHRRLH
Ocbimv22012575m.p	C2H2 ZF	504	526	FKCSMCSKAFTQLVNLRTHERVH
Ocbimv22012575m.p	C2H2 ZF	532	554	YRCNTCNKMFSQLSNLHAHERVH
Ocbimv22012575m.p	C2H2 ZF	560	582	FTCDLCSKSFAQRTTLINHKRSH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found