CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22012580m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22012580m.g	T140894_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22012580m.p	C2H2 ZF	94	116	FQCSFCKKGFSNQFFLKNHELTH
Ocbimv22012580m.p	C2H2 ZF	122	144	FECSYCGKAFTQKINLKNHLRTH
Ocbimv22012580m.p	C2H2 ZF	150	172	FQCTVCNKSFSQRGNLKLHLRTH
Ocbimv22012580m.p	C2H2 ZF	178	200	FACDVCGKAFSQKINLNDHKRLH
Ocbimv22012580m.p	C2H2 ZF	205	227	YYCQFCKKPFCNQFFLKIHERTH
Ocbimv22012580m.p	C2H2 ZF	232	254	YKCTFCTKSFTLQINLKNHLRTH
Ocbimv22012580m.p	C2H2 ZF	260	282	FQCNVCNKAFSQRGNLKLHLRTH
Ocbimv22012580m.p	C2H2 ZF	288	310	FACDICGKAFSQKINLNDHKRIH
Ocbimv22012580m.p	C2H2 ZF	315	337	FYCSYCKKSFCNQFFLKIHERTH
Ocbimv22012580m.p	C2H2 ZF	342	364	FKCEYCSKTFSQKINLKNHERTH
Ocbimv22012580m.p	C2H2 ZF	370	392	FQCHVCSKAFSQRGNLKLHLRTH
Ocbimv22012580m.p	C2H2 ZF	398	420	FACDVCGKAFSQKINLNDHKRLH
Ocbimv22012580m.p	C2H2 ZF	425	447	YYCQFCKKPFCNQFFLKIHERIH
Ocbimv22012580m.p	C2H2 ZF	452	474	YKCDYCPKEFTLQINLKNHMRTH
Ocbimv22012580m.p	C2H2 ZF	480	502	FKCNLCDKAFSQRGNLKLHLRTH
Ocbimv22012580m.p	C2H2 ZF	508	530	YCCDLCPKVFSQAGNLKTHLRTH
Ocbimv22012580m.p	C2H2 ZF	536	557	FKCESCGKSFSQKANLNNHRRT

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found