CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22012585m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22012585m.g	T140896_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22012585m.p	C2H2 ZF	12	34	FFCTFCKKGFTNQFFLKNHELTH
Ocbimv22012585m.p	C2H2 ZF	40	62	FDCNSCDKAFTQKINLKNHLRTH
Ocbimv22012585m.p	C2H2 ZF	68	90	FQCSLCPKAFSQQGNLKLHLRTH
Ocbimv22012585m.p	C2H2 ZF	96	118	YSCEVCGKSFSQKINLTYHNRIH
Ocbimv22012585m.p	C2H2 ZF	123	145	LYCQFCKKPFSNEFFLKIHERIH
Ocbimv22012585m.p	C2H2 ZF	151	173	FHCHFCNKCFSQETNLKNHLRTH
Ocbimv22012585m.p	C2H2 ZF	179	201	FSCSVCSKAFSQRGNLKLHLRTH
Ocbimv22012585m.p	C2H2 ZF	207	229	FACDVCGKAFSQKVNLSDHKRLH
Ocbimv22012585m.p	C2H2 ZF	234	256	FYCNYCKKPFCNQFFLKIHERTH
Ocbimv22012585m.p	C2H2 ZF	261	283	YKCTFCPKDFTLLINLKNHLRTH
Ocbimv22012585m.p	C2H2 ZF	289	311	FHCSMCSKSFSQQGNLKLHMRTH
Ocbimv22012585m.p	C2H2 ZF	317	339	FKCDLCEKCFSQKTNLENHQRVH
Ocbimv22012585m.p	C2H2 ZF	344	366	FKCDYCTKEFTLQISLKNHIRVH
Ocbimv22012585m.p	C2H2 ZF	372	394	FHCSYCNKLFSQRTEWRNHERTH
Ocbimv22012585m.p	C2H2 ZF	400	422	FQCQICSKAFSQAGNLKLHMRTH
Ocbimv22012585m.p	C2H2 ZF	428	449	FKCDTCNKSFSQRANLNNHKRT

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found