CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22015304m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22015304m.g	T140979_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22015304m.p	C2H2 ZF	10	32	HHCDICGKLFSESHKLITHKYTH
Ocbimv22015304m.p	C2H2 ZF	38	60	YHCDICGKSFFKNGNLTIHKRSH
Ocbimv22015304m.p	C2H2 ZF	66	88	YRCDICDKCFSASSNLTKHKRTH
Ocbimv22015304m.p	C2H2 ZF	94	116	YHCDICGKSFFQSHHLTEHKRSH
Ocbimv22015304m.p	C2H2 ZF	121	144	PCHCDICGRSFLRSNNLSRHKRIH
Ocbimv22015304m.p	C2H2 ZF	150	172	YQCDICGKSFTQNGELISHKHIH
Ocbimv22015304m.p	C2H2 ZF	178	200	FCCNICGKSFTQSGTLTSHKRIH
Ocbimv22015304m.p	C2H2 ZF	235	257	YHCDICSKSFSVKSYLVKHKQIH
Ocbimv22015304m.p	C2H2 ZF	263	285	YCCDICGKSFSGSGNLKTHKRIH
Ocbimv22015304m.p	C2H2 ZF	291	313	YHCDICGKVFSASSSLIKHKRIH
Ocbimv22015304m.p	C2H2 ZF	319	341	YHCDICGKSFPQNHHLTEHKRRH
Ocbimv22015304m.p	C2H2 ZF	347	369	YHCDICGKSFSVNSYFIKHKQIH
Ocbimv22015304m.p	C2H2 ZF	375	397	YCCDICGKSFSANSSLIKHIRVH
Ocbimv22015304m.p	C2H2 ZF	403	425	YQCDICGKPFSHNYNLNKHKRIH
Ocbimv22015304m.p	C2H2 ZF	431	453	YHCDICGKSFAQNHHLTEHKRIH
Ocbimv22015304m.p	C2H2 ZF	459	481	YHCDVCGKSFSESWNLKMHIRIH
Ocbimv22015304m.p	C2H2 ZF	487	509	YHCDICGKSFPQSGQLIKHKHIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found