CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22015307m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22015307m.g	T140982_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22015307m.p	C2H2 ZF	10	32	YHCDICGKLLCDSRTLITHKYIH
Ocbimv22015307m.p	C2H2 ZF	38	61	YNCDVCGKSFVHQSSFRRHKRIIH
Ocbimv22015307m.p	C2H2 ZF	67	90	HHCDICGRSFSQNQNLIEHKRVIH
Ocbimv22015307m.p	C2H2 ZF	96	118	YHCDICGKSYPLNYYLNKHKCFH
Ocbimv22015307m.p	C2H2 ZF	124	146	FYCNICGKSFSETSYLARHKRIH
Ocbimv22015307m.p	C2H2 ZF	152	174	HHCDICGRSFLRNQHLTKHIRSH
Ocbimv22015307m.p	C2H2 ZF	180	203	YHCDICGKSFSQNHHLTEHKRIIH
Ocbimv22015307m.p	C2H2 ZF	209	231	YLCDVCGHSFSFNHFLTKHKRIH
Ocbimv22015307m.p	C2H2 ZF	237	258	FYCNICAKSFSENSELLSHKHI
Ocbimv22015307m.p	C2H2 ZF	265	287	YLCDICGKSFSLNHNLTQHKRIH
Ocbimv22015307m.p	C2H2 ZF	293	315	YHCDICGKSYFDNYHLTEHKRIH
Ocbimv22015307m.p	C2H2 ZF	321	343	YHCDICGKSFTGSGNFATHKRVH
Ocbimv22015307m.p	C2H2 ZF	349	371	YCCDICGKPFSESSSVTVHKRIH
Ocbimv22015307m.p	C2H2 ZF	377	399	YRCEICGRSFNQNQHLIDHKRTH
Ocbimv22015307m.p	C2H2 ZF	405	427	YCCNICGKSFLRRGEVTIHKLMH
Ocbimv22015307m.p	C2H2 ZF	433	455	YHCDICGKSFYVKSRLTKHKHIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found