CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22015516m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22015516m.g	T140992_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22015516m.p	C2H2 ZF	10	32	FYCEICGKSFLRKNDLIKHVRIH
Ocbimv22015516m.p	C2H2 ZF	38	60	FHCDICGRSFSVSSSLTIHKHIH
Ocbimv22015516m.p	C2H2 ZF	66	88	HHCDICGKSFSECAKLSRHKRIH
Ocbimv22015516m.p	C2H2 ZF	94	116	FHCNICGKSFSQNSGLTTHKHIH
Ocbimv22015516m.p	C2H2 ZF	122	144	YHCDICGKSFSKSSGVTRHKLIH
Ocbimv22015516m.p	C2H2 ZF	150	172	YRCDICGKSFSTNSDLTEHIRMH
Ocbimv22015516m.p	C2H2 ZF	178	200	FHCDICGKSFSRRSVLTTHKRIH
Ocbimv22015516m.p	C2H2 ZF	206	228	YQCDVCGKSFSQKTVLTHHKRIH
Ocbimv22015516m.p	C2H2 ZF	234	256	YHCRICGKPFFRNSDLTKHVRMH
Ocbimv22015516m.p	C2H2 ZF	262	284	YQCNTCGKSFSASSDLTKHVRFH
Ocbimv22015516m.p	C2H2 ZF	290	312	YHCRICGKSFFRNSDLTKHVHRH
Ocbimv22015516m.p	C2H2 ZF	318	340	FHCDICGKSFSENSGLTQHEHMH
Ocbimv22015516m.p	C2H2 ZF	346	368	YQCHMCDKSFLRNSGLTKHVRIH
Ocbimv22015516m.p	C2H2 ZF	374	396	FHCDICKKSFIESNGLSRHKRIH
Ocbimv22015516m.p	C2H2 ZF	402	424	FRCDICGKLFSENSGLTKHKRMH
Ocbimv22015516m.p	C2H2 ZF	430	452	YQCDICSKSFSQNSVLTNHKRIH
Ocbimv22015516m.p	C2H2 ZF	458	480	YHCDICGKSFSQNSNFTQHMRIH
Ocbimv22015516m.p	C2H2 ZF	486	507	FCCDICGKSFADNCGLIKHVCM

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found