CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22015525m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22015525m.g	T141000_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22015525m.p	C2H2 ZF	10	32	YHCDVCGKIFSGKNVLTKHQLIH
Ocbimv22015525m.p	C2H2 ZF	38	60	FHCNICGKSFSTSSQVNIHERIH
Ocbimv22015525m.p	C2H2 ZF	66	88	FHCDVCGKSFSQNGILTRHKRIH
Ocbimv22015525m.p	C2H2 ZF	94	116	YPCDTCGKSFSHSNVLINHKRIH
Ocbimv22015525m.p	C2H2 ZF	122	144	YCCGVCGKSFSQNSTLMKHERIH
Ocbimv22015525m.p	C2H2 ZF	150	172	YNCDICGKSFALNGSLTTHKRVH
Ocbimv22015525m.p	C2H2 ZF	178	200	FHCDICGKLCSTASQLSFHKRIH
Ocbimv22015525m.p	C2H2 ZF	206	228	YRCEICGKSFYQNSLLTLHRRVH
Ocbimv22015525m.p	C2H2 ZF	234	256	FHCDVCGKSFSVCNALTTHKRIH
Ocbimv22015525m.p	C2H2 ZF	262	284	YHCDICGKSFSNCNILIIHKRVH
Ocbimv22015525m.p	C2H2 ZF	290	312	YHCDICGNYFSQNSTLTKHKRIH
Ocbimv22015525m.p	C2H2 ZF	318	340	FECQVCGKSFSRMDHLTKHKRIH
Ocbimv22015525m.p	C2H2 ZF	345	368	PCHCDVCGMSFSTDGNLISHKRIH
Ocbimv22015525m.p	C2H2 ZF	374	396	YHCDICSKSFSVGYALTTHKRIH
Ocbimv22015525m.p	C2H2 ZF	402	424	YHCDICGKSFAVCNALTTHKRIH
Ocbimv22015525m.p	C2H2 ZF	430	452	FPCDICGKSFSLSSSLNTHKRVH
Ocbimv22015525m.p	C2H2 ZF	458	480	YHCDICGKSFSQSSILSRHRRIH
Ocbimv22015525m.p	C2H2 ZF	486	508	FHCNMCGKSFAQKCNLTSHISIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found