CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22015814m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22015814m.g	T141014_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22015814m.p	C2H2 ZF	38	61	YCCEICRKTFSSEHEVFTHKETHH
Ocbimv22015814m.p	C2H2 ZF	91	113	FHCDICGKSFMSYNKLTRHKRIH
Ocbimv22015814m.p	C2H2 ZF	119	141	HQCEICGKSFSVSSCLVLHKRTH
Ocbimv22015814m.p	C2H2 ZF	147	169	YHCDVCGKSFSGKFSLVVHTRIH
Ocbimv22015814m.p	C2H2 ZF	175	197	FHCDLCGKSFTQNSHLVVHKSIH
Ocbimv22015814m.p	C2H2 ZF	203	225	FLCDICGKSFVSNNKLTRHTRIH
Ocbimv22015814m.p	C2H2 ZF	231	253	YHCEICGKSFSASSCLVLHKRTH
Ocbimv22015814m.p	C2H2 ZF	259	281	FRCELCGKSFSGKFSLVVHTRIH
Ocbimv22015814m.p	C2H2 ZF	287	309	FHCEICGKSFSSNSHLVVHKRIH
Ocbimv22015814m.p	C2H2 ZF	315	337	FSCEICGKSFISNNKLTRHVRVH
Ocbimv22015814m.p	C2H2 ZF	343	365	YHCEICGKSFSVNSCVIVHKRTH
Ocbimv22015814m.p	C2H2 ZF	371	393	YHCQLCGKSFLTSTQLKTHKQIH
Ocbimv22015814m.p	C2H2 ZF	399	421	FHCELCGKLFSDNSRFVVHKKMH
Ocbimv22015814m.p	C2H2 ZF	427	449	FDCDTCGKAFMQKSHLVVHKRIH
Ocbimv22015814m.p	C2H2 ZF	455	477	YCCETCGKSFITNSYLTKHKRTH
Ocbimv22015814m.p	C2H2 ZF	483	505	FRCDTCGKCFSTNGNLKTHKRIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found