CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22015815m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22015815m.g	T141015_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22015815m.p	C2H2 ZF	61	83	YHCDICGKSFSEKVHLITHKRIH
Ocbimv22015815m.p	C2H2 ZF	89	111	YHCNICGKSFSQNHSLAIHKCIH
Ocbimv22015815m.p	C2H2 ZF	117	139	YHCNICGKSFSGNSDLTTHKRIH
Ocbimv22015815m.p	C2H2 ZF	145	167	YQCDICGKSFSQNHHLITHKHIH
Ocbimv22015815m.p	C2H2 ZF	173	195	YNCDVCGKSFSQKNNLTIHKRIH
Ocbimv22015815m.p	C2H2 ZF	201	223	YHCDLCGKSFSQNHSLTTHKYIH
Ocbimv22015815m.p	C2H2 ZF	229	251	YHCDICGKSFSQINNLITHKRIH
Ocbimv22015815m.p	C2H2 ZF	257	279	YSCDICGKSFSQSYDLSKHKRIH
Ocbimv22015815m.p	C2H2 ZF	285	307	YHCDTCGKSFSQNHILTNHKRIH
Ocbimv22015815m.p	C2H2 ZF	313	335	YHCDICGKSFSQNVVLTKHMRIH
Ocbimv22015815m.p	C2H2 ZF	341	363	YHCDICGKSFSQSDVLTNHKRIH
Ocbimv22015815m.p	C2H2 ZF	369	388	YHCDICGKSFSQNQHLTKHK
Ocbimv22015815m.p	C2H2 ZF	397	417	YYCDICGKSFAGDLNTHKRIH
Ocbimv22015815m.p	C2H2 ZF	423	445	YHCDVCGKSFSLNQHLTKHKLIH
Ocbimv22015815m.p	C2H2 ZF	451	473	YHCNICGKSFSQSDVLIKHRRVH
Ocbimv22015815m.p	C2H2 ZF	479	501	YVCDICGKSFSQNHTLISHKHIH
Ocbimv22015815m.p	C2H2 ZF	507	529	YHCDICKKSFSQKANLTTHKQIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found