CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22015816m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22015816m.g	T141016_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22015816m.p	C2H2 ZF	17	38	HCKICGKSFFQNSNLVIHVRSH
Ocbimv22015816m.p	C2H2 ZF	44	66	FHCEICGKSFVANTNLTAHRLIH
Ocbimv22015816m.p	C2H2 ZF	72	94	YHCQVCGKSFSNNSNLITHIRSH
Ocbimv22015816m.p	C2H2 ZF	100	122	YHCQVCGKSFSNNSNLIAHIRSH
Ocbimv22015816m.p	C2H2 ZF	128	150	YQCKTCGKFFVSNSVLTKHNRIH
Ocbimv22015816m.p	C2H2 ZF	156	178	YRCETCGKSFVKNDDLSRHKLIH
Ocbimv22015816m.p	C2H2 ZF	184	206	FHCEICGKSFTQNSSLVIHIRRH
Ocbimv22015816m.p	C2H2 ZF	212	234	YHCEICEKSFVTGDYLNRHKRIH
Ocbimv22015816m.p	C2H2 ZF	286	308	HCCDICGKSFSQSHHLTTHKRIH
Ocbimv22015816m.p	C2H2 ZF	314	336	YNCDICGRSFPQNHHLIIHKRIH
Ocbimv22015816m.p	C2H2 ZF	342	364	YHCGVCGKSFAQNHILINHKRIH
Ocbimv22015816m.p	C2H2 ZF	370	392	FHCDICGKFFTQNDGLIKHIRIH
Ocbimv22015816m.p	C2H2 ZF	398	420	YHCDICGKSFSQSDVLTKHKRIH
Ocbimv22015816m.p	C2H2 ZF	426	448	YHCDICGKSFSQNHHLTKHKPTH
Ocbimv22015816m.p	C2H2 ZF	454	476	YHCDICGKSFSQINNLTTHKRIH
Ocbimv22015816m.p	C2H2 ZF	482	504	YCCDICGKSFSQNHHLTEHKYIH
Ocbimv22015816m.p	C2H2 ZF	510	532	YHCDTCGKSFSQINNLNTHRRIH
Ocbimv22015816m.p	C2H2 ZF	538	560	YHCDFCGKSFSQNHNLMTHKHIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found