CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30003570m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30003570m.g
T142190_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23926354_peptide
C2H2 ZF
13
35
FQCTVCGKNLGRKWDLIRHMRTH
23926354_peptide
C2H2 ZF
41
63
FQCSQCDKTFSVKSSLDCHVKLH
23926354_peptide
C2H2 ZF
69
91
HQCDLCVKKFARRWDLLRHRETH
23926354_peptide
C2H2 ZF
97
119
YQCSLCGKSYSVKNSLDCHMRIH
23926354_peptide
C2H2 ZF
125
147
FQCAVCAKGFARKWDYLRHVQSH
23926354_peptide
C2H2 ZF
153
175
YTCELCGKTLASKSSLRYHRQIH
23926354_peptide
C2H2 ZF
191
213
YNCLICDKKFSRKWDMYRHVRTH
23926354_peptide
C2H2 ZF
219
241
FKCCECEKDFAVKSSLDYHMKSH
23926354_peptide
C2H2 ZF
247
269
HQCVLCAKHFARKWDLIRHMRIH
23926354_peptide
C2H2 ZF
275
297
HQCSVCEKSFSIKQSLIRHMETH
23926354_peptide
C2H2 ZF
304
326
YPCLLCNTKFFEKNSLDYHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
0 Related TFs
">No related TF found