CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30003688m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30003688m.g
T142191_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23943768_peptide
C2H2 ZF
22
44
YQCKVCDKCFTQKGNLKTHMRVH
23943768_peptide
C2H2 ZF
50
72
YQCKECNKYFTRKGNLKSHLRVH
23943768_peptide
C2H2 ZF
78
100
YECKECNKCFTWKGDLKKHMRVH
23943768_peptide
C2H2 ZF
106
128
YQCKVCDKHFTQKGTLNIHMRVH
23943768_peptide
C2H2 ZF
134
156
YQCKECIECFTENSHLKRHMRVH
23943768_peptide
C2H2 ZF
162
184
YQCKECNKYFTWKGGMKRHMRVH
23943768_peptide
C2H2 ZF
190
212
YQCKECDKCFTQKGTLNIHMRVH
23943768_peptide
C2H2 ZF
218
240
YQCKECNKYFTWKDNLKSHLRVH
23943768_peptide
C2H2 ZF
246
268
YECKECNKCFTWKVQLETHMSVH
23943768_peptide
C2H2 ZF
276
296
GKECDKFYKNKCSLKTHMKVH
23943768_peptide
C2H2 ZF
302
324
YQCKECDKFYKNKCSLKTHMKVH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
0 Related TFs
">No related TF found