CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30009211m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30009211m.g
T142233_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23953370_peptide
C2H2 ZF
267
289
HKCKICSFTCKFKSNLIKHKRSH
23953370_peptide
C2H2 ZF
316
339
YRCNQCDYTCKFKYRLKDHKASQH
23953370_peptide
C2H2 ZF
353
375
YVCDICGHIALNKYKISRHIRKH
23953370_peptide
C2H2 ZF
381
403
FKCEECAMCFSERGNLLKHQGRH
23953370_peptide
C2H2 ZF
409
431
FLCEECGKAFKRDINLRMHRRIH
23953370_peptide
C2H2 ZF
437
460
YECVNCDYKCVRKDMLESHRARKH
23953370_peptide
C2H2 ZF
467
489
LCDHCGKGFYTKQELESHRRNKH
23953370_peptide
C2H2 ZF
496
518
HRCILCDLSFITEYKLKAHLKTH
23953370_peptide
C2H2 ZF
524
546
FKCDFCGVLFRKSASLIYHRRVH
23953370_peptide
C2H2 ZF
552
575
LQCELCTYVTSTPSNMYKHRKREH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
0 Related TFs
">No related TF found