CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30020206m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30020206m.g
T142319_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23927344_peptide
C2H2 ZF
59
81
YQCNYCDKCCTQLSNLKSHMRSH
23927344_peptide
C2H2 ZF
87
109
FTCEICGDAFRWQKQYKGHMVKH
23927344_peptide
C2H2 ZF
115
137
YACKICGKVFLTRVSLNKHNTIH
23927344_peptide
C2H2 ZF
142
164
FRCNQCDKRFTTNDVLKQHMQIH
23927344_peptide
C2H2 ZF
170
192
FKCDQCYKSFKRNESLKIHLRSH
23927344_peptide
C2H2 ZF
198
221
FTCGQCEISYSSLNSLKKHVESVH
23927344_peptide
C2H2 ZF
228
250
YKCEQCGQTFLLKHKLNAHMNTH
23927344_peptide
C2H2 ZF
254
276
YKCDTCGHRSSRKYDLKKHMRTH
23927344_peptide
C2H2 ZF
282
304
YQCDLCEKRFVQSSCLNVHLKTH
23927344_peptide
C2H2 ZF
312
332
YKECKKMFKSEEYLQRHQKMH
23927344_peptide
C2H2 ZF
340
361
HQCLNCCRRFRRKSGLLSHLRT
23927344_peptide
C2H2 ZF
368
390
FKCHQCDVKFACSKSLKYHMKLH
23927344_peptide
C2H2 ZF
396
418
YKCQICETHLRRKDYLKKHMQIH
23927344_peptide
C2H2 ZF
424
446
YKCEVCGKGFNHQIGIKRHMQKH
23927344_peptide
C2H2 ZF
452
474
HPCNECDKSFSESESLKRHMLLH
23927344_peptide
C2H2 ZF
482
504
YQCEHCEKSYAWRKSLVNHLKIH
23927344_peptide
C2H2 ZF
511
531
VCKKCGTKFPDSDSLKRHACS
23927344_peptide
C2H2 ZF
537
558
YQCRECGISFEDKTNLKRHMQG
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
0 Related TFs
">No related TF found