CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30035047m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30035047m.g
T142436_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23930766_peptide
C2H2 ZF
16
38
IQCTECDKRFSRTGHLKSHMKVH
23930766_peptide
C2H2 ZF
44
66
YRCKICDVHLSSAGSLKSHLRLH
23930766_peptide
C2H2 ZF
72
94
YKCRECDKRFTNTGNLKSHMRVH
23930766_peptide
C2H2 ZF
100
122
YQCKDCDRRFFSTGDRRRHMRVH
23930766_peptide
C2H2 ZF
128
150
YQCKVCDVRFTNTCNLKTHMRVH
23930766_peptide
C2H2 ZF
156
178
YHCNLCEDCFSNAASLKTHLLMH
23930766_peptide
C2H2 ZF
184
206
HQCKECNKCFINTGTLKTHMRVH
23930766_peptide
C2H2 ZF
212
234
YQCKVCNACFTSTGNLKKHMIVH
23930766_peptide
C2H2 ZF
240
262
YQCNVCGMCITNAANLKTHMRLH
23930766_peptide
C2H2 ZF
268
290
YQCKICKERFNATRKLKIHMREH
23930766_peptide
C2H2 ZF
296
318
YHCDVCDKGFITAGNLKIHMLLH
23930766_peptide
C2H2 ZF
324
346
YLCNRCDKRFANKGSLTWHMRVH
23930766_peptide
C2H2 ZF
355
377
YQCTVCDKCFNDKCILGGHLMLH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
0 Related TFs
">No related TF found