CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30038412m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30038412m.g
T142456_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23930859_peptide
C2H2 ZF
15
37
YQCKVCDKHFTQKAILKRHVRVH
23930859_peptide
C2H2 ZF
43
65
YQCKECKKCFTEKSNLKSHMRVH
23930859_peptide
C2H2 ZF
71
93
YQCKVCDKCFINTSNQKKHMRVH
23930859_peptide
C2H2 ZF
99
130
YQCKERNKCFTEKICDKCFINTSNQKKHMRVH
23930859_peptide
C2H2 ZF
183
195
PYQCHLKRHMRVH
23930859_peptide
C2H2 ZF
201
223
YQCKECDKCYIWKGDLKKHMRVH
23930859_peptide
C2H2 ZF
229
251
YECEECNKRFTWKDHLKTHMRVH
23930859_peptide
C2H2 ZF
257
279
YQCKECNKRFTWKDNLKSHMRVH
23930859_peptide
C2H2 ZF
285
307
YKCKECNKCFTERCNLKKHMSVH
23930859_peptide
C2H2 ZF
313
335
YQCKECNKRFTEKSNLKRHMRVH
23930859_peptide
C2H2 ZF
341
363
HQCKVCGKCFSDTSNQKTHMRVH
23930859_peptide
C2H2 ZF
369
391
FQCKECNKCFTEKRTLKTHVRVH
23930859_peptide
C2H2 ZF
397
419
YQCKVCDKCFINTSNQKTHMRVH
23930859_peptide
C2H2 ZF
425
447
FQCKECNKCFSHKGHLKIHMRVH
23930859_peptide
C2H2 ZF
471
493
YQCKVCDKHFTQKAILKRHVRVH
23930859_peptide
C2H2 ZF
499
515
YECKECIKYFTRKGHLK
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
0 Related TFs
">No related TF found