CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30041535m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30041535m.g
T142478_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23955849_peptide
C2H2 ZF
1335
1357
YPCKICGLLLKSHRHLADHMSIH
23955849_peptide
C2H2 ZF
1391
1413
HSCTYCGKRFSASTSCRRHEKLH
23955849_peptide
C2H2 ZF
1419
1442
HRCEECKITFIYDTDLQRHILSTH
23955849_peptide
C2H2 ZF
1475
1498
HECPLCGKIFSKSSSLKCHASHVH
23955849_peptide
C2H2 ZF
2597
2618
TKCQGCARQFVDLVHLRKHMKM
23955849_peptide
C2H2 ZF
2652
2673
HKCPHCLRQFTYIESLRKHIDV
23955850_peptide
C2H2 ZF
1238
1260
YPCKICGLLLKSHRHLADHMSIH
23955850_peptide
C2H2 ZF
1294
1316
HSCTYCGKRFSASTSCRRHEKLH
23955850_peptide
C2H2 ZF
1322
1345
HRCEECKITFIYDTDLQRHILSTH
23955850_peptide
C2H2 ZF
1378
1401
HECPLCGKIFSKSSSLKCHASHVH
23955850_peptide
C2H2 ZF
2271
2293
TACNVCRIVFSSVNALRQHVVVH
23955850_peptide
C2H2 ZF
2328
2351
YLCSACQKEFLQFSKLERHQAVMH
23955850_peptide
C2H2 ZF
2500
2521
TKCQGCARQFVDLVHLRKHMKM
23955850_peptide
C2H2 ZF
2555
2576
HKCPHCLRQFTYIESLRKHIDV
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
0 Related TFs
">No related TF found