CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30045405m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30045405m.g
T142511_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23952456_peptide
C2H2 ZF
88
110
HVCPICGVKLTGQSQFKAHKKTH
23952456_peptide
C2H2 ZF
153
175
YVCDICGGKFKSKCSLKNHQKVH
23952456_peptide
C2H2 ZF
181
203
YKCDICSHRFPAKSTMLVHRRSH
23952456_peptide
C2H2 ZF
209
231
YKCHMCEKRFVKKGTLKEHVMSH
23952456_peptide
C2H2 ZF
237
259
YKCDTCGLTFKRKNNLNSHLRVH
23952456_peptide
C2H2 ZF
265
287
CLCDICGRMFSDTTRLNYHLRCH
23952456_peptide
C2H2 ZF
293
315
YKCNTCGKYFANKKYVKVHMLIH
23952456_peptide
C2H2 ZF
321
343
HHCDVCDKYFRHLSDLREHAKRH
23952456_peptide
C2H2 ZF
349
371
FQCETCGKNLASTRNLKLHQRIH
23952456_peptide
C2H2 ZF
377
397
YSCECGRKFSHQSSLRCHKNN
23952456_peptide
C2H2 ZF
408
430
FICRLCGEAFIFKYLLRKHMKIH
23952456_peptide
C2H2 ZF
464
486
FRCRVCGMQFLRKSTLKLHDRTH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
0 Related TFs
">No related TF found