CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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est_orfs.Chr_08_3060_3201096:1
(
Micromonas sp RCC299
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
est_orfs.Chr_08_3060_3201096:1
T142806_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
53189
C2H2 ZF
269
290
KCIACGRCFDTPYKLEDHMNLH
53189
C2H2 ZF
296
320
FACTVPGCGAAFSNRTALSKHKKTH
53189
C2H2 ZF
324
348
FACPAPGCNLAFSNAYDLKRHSVTH
53189
C2H2 ZF
354
376
FACKTCGKTFKLENALIAHQRVH
53189
C2H2 ZF
382
406
FKCEHPGCGKLFGYKVDLQRHERTH
Links
Other
C2H2 ZF
family TFs
Other
Micromonas sp RCC299
TFs
0 Related TFs
">No related TF found