CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene02109-v1.0-hybrid
(
Fragaria vesca
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gene02109-v1.0-hybrid
T142940_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna02109.1-v1.0-hybrid
C2H2 ZF
19
42
YYCEYCGICRSKKTLIASHKLAQH
mrna02109.1-v1.0-hybrid
C2H2 ZF
61
82
TCEECGASFKKPAYLKQHMLSH
mrna02109.1-v1.0-hybrid
C2H2 ZF
192
216
YVCTIDDCRSTYRRKDHLNRHLLQH
mrna02109.1-v1.0-hybrid
C2H2 ZF
221
246
FKCPIENCKSEFAFQGNVKRHVVEFH
mrna02109.1-v1.0-hybrid
C2H2 ZF
261
285
HVCQEPGCGKVFQFASKLRKHEDSH
mrna02109.1-v1.0-hybrid
C2H2 ZF
294
318
FCSEPDCMKYFSNKQCLQEHIQSCH
mrna02109.1-v1.0-hybrid
C2H2 ZF
351
376
IKCEYEGCLHTFTKKSNLLRHVKAVH
Links
Other
C2H2 ZF
family TFs
Other
Fragaria vesca
TFs
0 Related TFs
">No related TF found