CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU08159
(
Neurospora crassa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
NCU08159
T144878_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU08159
M01891_2.00
Neurospora crassa
HGCCYTAY
RTARGGCD
PBM
Weirauch et al.(2014)
pTH9689
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01891_2.00
C2H2 ZF
52
76
YMCECCPKKPKKFDTEEDLKLHEAE
M01891_2.00
C2H2 ZF
79
102
YGCSFCGNRFKNKNEAERHQNSLH
M01891_2.00
C2H2 ZF
131
144
DTCGYCGEEFARTG
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU08159
C2H2 ZF
506
530
YMCECCPKKPKKFDTEEDLKLHEAE
NCU08159
C2H2 ZF
533
556
YGCSFCGNRFKNKNEAERHQNSLH
NCU08159
C2H2 ZF
585
598
DTCGYCGEEFARTG
Links
Other
C2H2 ZF
family TFs
Other
Neurospora crassa
TFs
0 Related TFs
">No related TF found