CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LOC100489238
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-1010453
T145345_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002931798
C2H2 ZF
239
261
FACVKCKRRFGSNGNLLIHQRIH
XP_002931798
C2H2 ZF
266
288
FSCTDCGKCFSHRTILREHRRAH
XP_002931798
C2H2 ZF
323
345
LTCTECGKSFKHKSYLLIHERTH
XP_002931798
C2H2 ZF
351
373
YVCTQCGKGFSQKVHLETHSLSH
XP_002931798
C2H2 ZF
379
401
FSCTECGKCFRLKQHLKIHEKTH
XP_002931798
C2H2 ZF
407
429
FVCTECGKRFIQKHSLRQHQRIH
XP_002931798
C2H2 ZF
435
457
FVCNVCGKGHSRNEHLKAHLRVH
XP_002931798
C2H2 ZF
463
485
FACTECNKTFRSDRWLHAHKLTH
XP_002931798
C2H2 ZF
491
513
FKCKECDQSFTTNGDLTKHSLIH
XP_002931798
C2H2 ZF
519
541
FICPECGKCFRIKSNLKSHEKTH
XP_002931798
C2H2 ZF
547
569
FACTECGKRFTDKRSLHHHLMIH
XP_002931798
C2H2 ZF
575
597
FVCSECGKSYRQKKSLNIHLRVH
XP_002931798
C2H2 ZF
603
625
FACTECNKTFRLRRGLDIHKQTH
XP_002931798
C2H2 ZF
631
653
FQCNECGKSVSTKSDLNTHHRTH
XP_002931798
C2H2 ZF
659
681
YPCSKCGKSFSTKKSLHQHGHTH
XP_002931798
C2H2 ZF
687
709
YACTECGKCFRNKADLKCHQSAH
XP_002931798
C2H2 ZF
715
737
FQCTECGKSFPSQTVLNIHQKIH
XP_002931798
C2H2 ZF
743
765
FQCTECDKCFCYRQALTAHQRIH
XP_002931798
C2H2 ZF
771
793
FGCTECGKQFLAKYSLQRHLMIH
XP_002931798
C2H2 ZF
799
821
FVCTECGKSYRHKRNLNIHMNSH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
0 Related TFs
">No related TF found