CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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xfo1-1
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-6485413
T145585_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002942390
C2H2 ZF
177
198
FICNKCGKMFSSSRDLLTHLCA
XP_002942390
C2H2 ZF
227
249
FCCKECGKSFSYKMGVIKHAKVH
XP_002942390
C2H2 ZF
255
277
FPCPECGKCFTLKCNLQKHLKIH
XP_002942390
C2H2 ZF
283
305
FTCPECGKSFTQKAGLQVHQNMH
XP_002942390
C2H2 ZF
311
333
FICTECGRSFPKKSTLQKHGKIH
XP_002942390
C2H2 ZF
378
400
YKCTECGDSFFHNSHLVIHRKVH
XP_002942390
C2H2 ZF
406
428
FRCKECGEAFSKRKPLKKHRRLH
XP_002942390
C2H2 ZF
434
456
FVCRACGKLFARKLLLQNHQKEH
XP_002942390
C2H2 ZF
462
490
FTCAQCGKSFSKKFNLMRHEKSSLQIHQK
XP_002942390
C2H2 ZF
498
520
FPCAYCDKSFSRKFNLLRHEIVH
XP_002942390
C2H2 ZF
524
541
ITCKVCGRGFHQKVSLKI
XP_002942390
C2H2 ZF
568
590
FKCPRCGDTFFQKSHLLAHQKVH
XP_002942390
C2H2 ZF
596
618
FSCAKCGERFPTNKELRKHRKSH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
0 Related TFs
">No related TF found